Daily Log

From Yukishiro

(Difference between revisions)
(→April 2007)
(→April 2007)
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==April 2007==
==April 2007==
 +
'''April 23'''
 +
# Write matlab script to test phase correlation (including rotation)
 +
# weighted cross-correlation
 +
 +
'''April 19'''
'''April 19'''
# Scan time
# Scan time
-
#* Add vitamin-E pills
+
#* <s>Add vitamin-E pills</s>
#* Get translational raw data first (to verify the peak positions)
#* Get translational raw data first (to verify the peak positions)
#* Get out-of-plane rotational raw data
#* Get out-of-plane rotational raw data
-
#* Get in-plane rotational raw data
+
#* <s>Get in-plane rotational raw data</s>

Revision as of 02:56, 22 April 2007

Contents

April 2007

April 23

  1. Write matlab script to test phase correlation (including rotation)
  2. weighted cross-correlation


April 19

  1. Scan time
    • Add vitamin-E pills
    • Get translational raw data first (to verify the peak positions)
    • Get out-of-plane rotational raw data
    • Get in-plane rotational raw data


April 18

  1. MR Group Meeting
  2. Write wiki docs for image registration module and update the same section in work report
  3. Meeting with Bonny
  4. Gym
  5. GPU tests
    found a bug in RM - MI cannot be done if that's not fixed
    accuracy would be an issue


April 11

  1. Update rtViewer document (before group meeting)
  2. Run qrth with scanplanectrl plugin (noon-ish)
  3. Make a branch to change the way Rufous selects raw data for volproj (afternoon)
  4. Run
  5. Write test plans for CPU version of MI (put it on c8 as well)


April 6

  1. Modify and improve mutual information code
  2. Run

March 2007

March 27th

  1. Finish MI code
    haven't tested it yet
  2. Scan test (FFS, FFP, HFP) - rtViewer (2:30 - 4:00pm)
  3. Gym
  4. RENDER METHOD FOR CLOUD


March 26th

  1. Print out scholarship application and mail it.


March 24th & 25th

  1. Finish scholarship application.
    resume not updated
  2. File tax
  3. Clean mutual information code.</>
    being done
  4. Cloud -> understand how to render the cloud


March 23rd

  1. <s>Eposter for INO - morning
  2. Double check Rufous' geometry pipeline
  3. Skype


March 22nd

  1. Write more test cases for rotation and translation.
  2. Read about grub
  3. Find out the bug for geometry!!!
  4. Gym


March 21st

  1. Investigate memory leak issue. (try HEAD version)
  2. Complete changelist on wiki. Checkin multiplane changes.
  3. GYM!!
  4. START CLOUD SIMULATION CODE!
    instead..i started installing Gentoo..and failed..


March 20th

  1. Burn Gentoo CD (and take one blank for bootcamp)
  2. Double check doxygen comments (check in the code this week)
  3. Run Rufous with Valgrind. Test it in multiple imaging modes.
    need to fix some of the leaks/reachables
  4. Write plans for animal study, and test Rufous during the study (1:00 - 6:00pm)
  5. Gym (8:00-9:00, high-low impact)
     :-(
  6. Reinstall OSX, bootcamp, Ubuntu, and drivers.
     :-)


March 19th

  1. Course enrollment (fax the form in S Wing)
  2. Make Rufous backward compatible with the old volproj
  3. 1.5T test (1pm - 5pm)
  4. Think about how to do picking (GL or custom class)


March 17th, 18th

  1. A3 - finish loading scene and orientation!!
  2. A3 - finish picking!!


March 16th

  1. rtViewer user manual
  2. Investigate geometry problem for Rufous
    @#$@#%@#%#$%^$^$$%@#$@#$
  3. Buy Mihaela a coffee and talk to her about the project
  4. Finish tax filing
    need to submit the file


March 15th

  1. Finish e-poster
  2. Finish Electrohome first draft
    draft done
  3. Find what's causing the geometry problem
    not the type conversion problem. need more investigation


March 13th

  1. Add doxygen document to merge branch
  2. Co-op coordinator meeting (11:00 - 12:00)
  3. VolProj study (13:00 - 16:00)
  4. Summrize study results


March 12th

  1. Double check the set-up on IRCCI MR3 (old Rufous and old volproj module). Write short plan as preparation for the study.
  2. Volproj study: 10:00 - 13:00
  3. Multiplane Rufous + Catheter testing: 14:00 - 16:00
  4. Summarize study and test results.
    • e-poster outline is not finished


March 11th

  1. Reading and writing practice
  2. Gym
  3. Coding A3 (MUST FINISH!!!)

JING'S NOT HAPPY WITH THE PROGRESS TODAY...:(


March 10th

  1. Reading and writing practice
  2. Laundry
  3. Grocery
  4. Go out with Janet


March 9th

  1. Go to payroll and fill out the form
  2. Update multiplane design doc
  3. VolProj leg study trial
    Cancelled due to construction
  4. Finish GeomMgr integration stage 1
    Almost done. Need test cases. Investigate CppUnit.
  5. Gym (leave early)


March 8th

  1. Check in multiplane rtviewer
  2. Restart geom manager integration coding


March 7th

  1. Verify the merge branch works well in simulation (multiplane + multicoil + movie recording + volproj + cath)
  2. CTO Study
  3. Gym


March 6th

  1. Leg experiment - 10:00am (Make sure the right version of Rufous and volproj module is uploaded)
  2. Image registration (cont'd)
  3. Talk to Desmond


March 5th

  1. Write out the volproj fft result to files and load up with matlab
  2. scan time 10:00am to 11:00am (which is the first projection data?)
  3. Double check multiplane Rufous and rtViewer again and get ready for CVS checkin
  4. Image registration reading (as well as rtViewer doc update)
    rtViewer doc is still not updated
  5. Gym & Post office
    Post office, but no gym
  6. New word list (9-10pm)
  7. Fix the translation "lag" problem in all assignments
  8. Start the cloud data structure


March 4th

  1. Start implementing cloud using the technique on the paper
  2. Grocery
  3. Shovel (cont'd)
  4. Do some reading - orlando


March 3rd

  1. Buy Janet present
  2. Shovel
  3. Laundry
  4. Read the cloud paper again
  5. Finish A3 orientation mode


March 1st

  1. Update Rufous documentation for multiplane
  2. Test rtViewer multiplane with single-plane Rufous then merge master with multiplane
  3. Update volproj recon module<s>
  4. Update image registration document (rtViewer part)

Feb 2007

Feb 27

  1. Prepare for the demo in the afternoon.
    • <s>Run Rufous in multicoil mode and see the sum of square thing.
    • Copy the volproj movies and draft a small presentation.
    • Look at the image registration code (?)

Jan 2007

Jan 14

  1. Blender IRC meeting @ 12pm
  2. Continue A2 coding

Jan 13

  1. Laundry
  2. A2 coding
  3. Blender reading

Jan 12

  1. Grocery
  2. Upgrade system (try xubuntu first, if fails then try ubuntu)
  3. Skype
  4. Make coding schedule for A2
  5. DP: Abstract Factory and Factory, review Bridge

Jan 10

  1. Review some slides in GPU course (9-10)
  2. singleton
  3. A2 start

Jan 9

  1. Review some slides in GPU course (3-6)

Jan 8

  1. Mipmaps definition
  2. Finish paper reading
    up to page 14 --Jing 23:09, 8 January 2007 (EST)
  3. Download GPU Gems 2
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